The Schmidt lab invents and applies protein engineering technologies to study fundamental neuronal signaling processes at a cellular level. We are seeking mechanistic explanations for how neurons sense, integrate and exchange information, how pathologic changes in these processes relate to health and disease, and provide insights into new therapies for neuropsychiatric disorders including brain cancers.
Typical questions we ask are: What are the minimally required functional features of cellular components that regulate neuronal homeostasis and signal transduction? How does their activity change during normal development? What are specific activity patterns associated with disease onset? How can we re-engineer cellular signaling systems for therapeutic purposes? We answer these questions by inventing custom-made methods to observe, delineate and precisely control neuronal physiology. Our approach employs techniques from multiple disciplines including optogenetics, electrophysiology, and rational protein design.
(For a comprehensive list of recent publications, refer to PubMed, a service provided by the National Library of Medicine.)
- Coyote-Maestas W, Nedrud D, Okorafor S, He Y, Schmidt D. Targeted insertional mutagenesis libraries for deep domain insertion profiling. Nucleic Acids Res. 2019 Nov 20. pii: gkz1110.
- Geurts YM, Dugué PA, Joo JE, Makalic E, Jung CH, Guan W, Nguyen S, Grove ML, Wong EM, Hodge AM, Bassett JK, FitzGerald LM, Tsimiklis H, Baglietto L, Severi G, Schmidt DF, Buchanan DD, MacInnis RJ, Hopper JL, Pankow JS, Demerath EW, Southey MC, Giles GG, English DR, Milne RL. Novel associations between blood DNA methylation and body mass index in middle-aged and older adults. Int J Obes (Lond). 2017 Oct 16.
- Schmidt D, Cho, YK. Natural photoreceptors and their application to synthetic biology. Trends Biotechnol. 2015;33(2):80-91.
- Schmidt D, Tillberg PW, Chen F, Boyden ES. A fully genetically encoded protein architecture for optical control of peptide ligand concentration. Nat Commun. 2014;5:3019.
- Schmidt D, del Marmol J, Mackinnon R. Mechanistic basis for low threshold mechanosensitivity in voltage-dependent K+ channels. Proc Natl Acad Sci U S A. 2012;109(26):10352-10237.
- Zamft BM1, Marblestone AH, Kording K, Schmidt D, Martin-Alarcon D, Tyo K, Boyden ES, Church G. Measuring cation dependent DNA polymerase fidelity landscapes by deep sequencing. PLoS ONE 2012;7:e43876.